Inference
Advertisement
Infer.NET v.2 2
Infer.NET is a framework for running Bayesian inference in graphical models. It can also be used for probabilistic programming as shown in this video. You can use Infer.
Python OpenBayes-0.1.0 v.0.1.0
OpenBayes is a library that allows users to easily create a bayesian network and perform inference on it.
HMM v.1.0
This toolbox supports inference and learning for HMMs with discrete outputs (dhmm's), Gaussian outputs (ghmm's), or mixtures of Gaussians output (mhmm's). The Gaussians can be full, diagonal, or spherical (isotropic).
Phylo_win v.2.0
Molecular phylogenetic inference made easy. Phylo_win is a graphical colour interface for molecular phylogenetic inference. It performs neighbor-joining, parsimony and maximum likelihood methods and bootstrap with any of them.
UNPHASED v.3.1.5
UNPHASED is an software for performing genetic association analysis in nuclear families and unrelated subjects. It implements maximum-likelihood inference on haplotype and genotype effects while allowing for uncertain phase and missing genotypes.
DNAdistree v.1.0
DNAdistree is a utility for distance-based phylogeny inference from DNA sequences. More precisely, DNAdistree performs several successive steps: 1. it reads DNA sequence alignments (nucleotides or codons); 2. it estimates unbiased pairwise distances
Genie v.3.0
Genie (Genealogy Interval Explorer) is a software for the inference of demographic history from molecular phylogenies. A software for the inference of demographic history from reconstructed molecular phylogenies. It is primarily designed for the
BayesAss v.1.0
Inference of recent migration rates between populations using multi-locus marker genotype data.
GeneNetWeaver v.1.0
GeneNetWeaver (GNW) is an open-source tool for in silico benchmark generation and performance profiling of network inference methods.